Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGAGCCTAGCTGCT
..(((((((.((((..(((((&)))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024821
GeneSymbolCCDC134
Binding site25,44
Score0.846
Seed1
Au0.397
Energy-23.0
Binding len19
Me-7.168
Phylopstem-0.661792
Phylopflank-0.6280332997115384
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure