Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTTGCCGGGG
.(((((((.(((..((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024825
GeneSymbolPODNL1
Binding site260,275
Score0.923
Seed1
Au0.265
Energy-17.9
Binding len15
Me-6.996
Phylopstem-0.08646397142857142
Phylopflank-0.33505294125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure