Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACATGGGTAGCTGCT
..((((((((...(((.((((&)))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024827
GeneSymbolHDAC11
Binding site2774,2794
Score1.0
Seed1
Au0.578
Energy-22.4
Binding len20
Me-12.418
Phylopstem-0.3112571125
Phylopflank-0.1608387541617647
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure