Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCCCCGGGATGCTACACACAACCCAGCTGTAC
.((((((((.((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024827
GeneSymbolHDAC11
Binding site30,66
Score1.0
Seed1
Au0.368
Energy-21.9
Binding len16
Me-5.036
Phylopstem1.596176375
Phylopflank1.3454245312962965
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure