Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTGCACAGCAACTGGAGCTGCT
..((((((.((((((((((((&))))).......))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024828
GeneSymbolCAAP1
Binding site1076,1103
Score1.0
Seed1
Au0.529
Energy-25.2
Binding len27
Me-6.013
Phylopstem0.4438796052631579
Phylopflank0.5637926149999999
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure