Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCGCCACCGCTTCTGCTGCT
..(((((.((((((((..(((&)))))))))))..........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024829
GeneSymbolPLBD1
Binding site222,249
Score1.0
Seed0
Au0.309
Energy-21.0
Binding len27
Me-7.271
Phylopstem1.9729341249999999
Phylopflank2.6358002150000006
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure