Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCTGTGTGCTGGA
..((((((((((..(((((...&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024830
GeneSymbolLPCAT1
Binding site2209,2226
Score0.846
Seed1
Au0.618
Energy-18.6
Binding len17
Me-7.103
Phylopstem-0.3629497
Phylopflank0.05774018250000029
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure