Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGAGGAGGAGAAGAGGAACCCCGCGCTGTATGCCAGC
..((((((((((.(((......&.))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024830
GeneSymbolLPCAT1
Binding site953,992
Score0.846
Seed1
Au0.368
Energy-18.6
Binding len16
Me-6.246
Phylopstem-0.5492913
Phylopflank-0.708851705
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure