Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCCTCTCCAACAACCGCAAGCTGTAC
.(((((((((((((((..((.&.)).))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024832
GeneSymbolRIN3
Binding site1928,1958
Score1.0
Seed1
Au0.456
Energy-25.1
Binding len21
Me-3.793
Phylopstem1.7721161874999998
Phylopflank1.91109891625
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure