Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGGAAGGAGCACCGGCCACAGCTGCT
..(((((((.(((((......&.))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024832
GeneSymbolRIN3
Binding site3509,3539
Score0.923
Seed1
Au0.324
Energy-21.4
Binding len15
Me-6.433
Phylopstem0.29803099999999993
Phylopflank-0.42578855100000007
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure