Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCGTTAATCCTGTATGGCCAGGA
.(((((((((((..........&.)))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024834
GeneSymbolMCMBP
Binding site4120,4143
Score1.0
Seed1
Au0.529
Energy-16.7
Binding len14
Me-6.908
Phylopstem0.4981773666666667
Phylopflank0.2171940375
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end0
Position3UTR
2D Structure