Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCCCAATAAGCAGAAAGACCAACATGCAGGTGCC
..(((.((((((((((.((((&))))))))))......................)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024834
GeneSymbolMCMBP
Binding site782,823
Score0.846
Seed0
Au0.485
Energy-20.7
Binding len41
Me-6.858
Phylopstem0.4918098281249999
Phylopflank0.4632252775000001
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure