Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTATAACCGTGGAGGTAC
.(((..((((((((((((...&))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024837
GeneSymbolATP8B4
Binding site5211,5229
Score0.962
Seed0
Au0.618
Energy-18.3
Binding len18
Me-9.813
Phylopstem4.412833999999999
Phylopflank3.7824554087500006
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure