Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AAGCAAAGGATAGCTGTGGTTGCAT
.(((((((((((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024838
GeneSymbolTHNSL1
Binding site1487,1512
Score0.923
Seed1
Au0.676
Energy-20.8
Binding len17
Me-3.793
Phylopstem2.8703507512
Phylopflank4.1996019942
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure