Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTGCAAAAGTGGTTGCAGA
((((((((((..(((((((((&))).))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024838
GeneSymbolTHNSL1
Binding site2225,2248
Score0.872
Seed1
Au0.529
Energy-19.6
Binding len23
Me-10.109
Phylopstem4.3271085
Phylopflank3.99453642625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure