Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCGATAACCGCAGTCAGCC
..((.(((((((((((..((.&))..)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024841
GeneSymbolPRR5L
Binding site1139,1159
Score0.923
Seed0
Au0.426
Energy-21.3
Binding len20
Me-9.076
Phylopstem-0.4131143
Phylopflank2.392182065
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure