Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGTCTCCCTGGAGCTGCAC
.(((((((.(((..(...(((&)))....)..)).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024844
GeneSymbolNUP85
Binding site1374,1397
Score0.846
Seed1
Au0.382
Energy-18.5
Binding len23
Me-7.229
Phylopstem5.592289857142857
Phylopflank4.3986395025
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure