Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCGGCTGCAGCTGCT
..((((((((((((((..(((&)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024857
GeneSymbolATAD5
Binding site397,418
Score1.0
Seed1
Au0.353
Energy-28.6
Binding len21
Me-4.957
Phylopstem2.3169149285714288
Phylopflank1.8454409850000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure