Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATAAAAGGGGCTGTAT
.(((((((.(..((((((((.&))))))))..).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024860
GeneSymbolSETD6
Binding site2456,2476
Score1.0
Seed1
Au0.662
Energy-21.8
Binding len20
Me-11.021
Phylopstem2.60957
Phylopflank2.61585684
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure