Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGTTGGCCAGGC
.((((((...((((((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024865
GeneSymbolNANOG
Binding site2995,3010
Score0.846
Seed1
Au0.544
Energy-18.0
Binding len15
Me-8.406
Phylopstem0.046913375
Phylopflank-0.145525925
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure