Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCCAGCAGATGCAAG
(((((.(((((((((..((((&)))))))))....)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024865
GeneSymbolNANOG
Binding site568,592
Score0.923
Seed0
Au0.515
Energy-19.8
Binding len24
Me-6.072
Phylopstem2.538463
Phylopflank1.7160789412500004
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure