Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATAAAACTGCTCACGAAGATATCAGTCAACGTGTAGCTGCT
..(((((((((((((...(((&.)))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024867
GeneSymbolSPEF2
Binding site2545,2589
Score0.862
Seed1
Au0.588
Energy-19.8
Binding len22
Me-5.19
Phylopstem0.23126476428571424
Phylopflank0.6282802425
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure