Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCATCGGCGACGCGGACGCGGCTGCAGC
((((((((((((((((..(((&))).....))))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024871
GeneSymbolMAP6D1
Binding site383,413
Score0.846
Seed1
Au0.353
Energy-23.8
Binding len30
Me-3.938
Phylopstem-0.266545619047619
Phylopflank-0.41223988375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure