Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGA
...(((((((((((((.((((&.))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024874
GeneSymbolKIAA0319L
Binding site1232,1270
Score1.0
Seed0
Au0.529
Energy-24.1
Binding len20
Me-6.515
Phylopstem0.6991151357142857
Phylopflank0.9531732487500001
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure