Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCTCTCTGCGATGCAAG
(((((..((((((((((((((&)))))))))))....))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024874
GeneSymbolKIAA0319L
Binding site1896,1921
Score0.808
Seed0
Au0.515
Energy-21.6
Binding len25
Me-7.382
Phylopstem4.018107611111111
Phylopflank4.165963603624999
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure