Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCCACCAAGGCTGCAGG
((((((((..(((.((.(((.&)))..)).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024875
GeneSymbolSYNPO2L
Binding site1605,1627
Score0.923
Seed1
Au0.353
Energy-21.2
Binding len22
Me-7.093
Phylopstem0.56826575
Phylopflank0.3151692725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure