Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAACCTCCTGAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024884
GeneSymbolL2HGDH
Binding site2500,2526
Score0.846
Seed0
Au0.426
Energy-20.1
Binding len26
Me-5.728
Phylopstem0.15983270000000002
Phylopflank0.29394702875000006
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure