Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTCATAACCGTTCAGTTGCAGA
((((((((((((((((.....&.)))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024889
GeneSymbolPLEKHS1
Binding site2828,2853
Score0.923
Seed1
Au0.603
Energy-20.4
Binding len20
Me-3.938
Phylopstem-0.2390311266666667
Phylopflank0.05931734850000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure