Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCGGCAACCGCAGATTTGGTTTCTGCCGCCTGCGGG
((((((((((((((((..(((&.))).))))))))))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024898
GeneSymbolDENND1C
Binding site315,357
Score0.846
Seed1
Au0.368
Energy-24.9
Binding len38
Me-3.938
Phylopstem1.0634055125000001
Phylopflank0.004333717500000056
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure