Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCCGAGCCTCAGCTGCT
..(((((((.((((....(((&)))....)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024900
GeneSymbolJADE1
Binding site2562,2582
Score1.0
Seed1
Au0.456
Energy-21.1
Binding len20
Me-7.168
Phylopstem0.8041727285714286
Phylopflank0.14739593900000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure