Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGGTAACTAGCCAGGTG
(((((((.....((.((((...&)))).)).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024902
GeneSymbolDNAJC22
Binding site3457,3477
Score0.846
Seed1
Au0.5
Energy-17.3
Binding len20
Me-15.457
Phylopstem0.45768371428571436
Phylopflank0.3895658775
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure