Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACCGGATCTGGAGGCTACTGATGGGGGAGACTGGCTTCAACAGCAGCTGCT
..((((((((.((((.(((.(&.).))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024902
GeneSymbolDNAJC22
Binding site1484,1540
Score1.0
Seed1
Au0.456
Energy-23.1
Binding len20
Me-8.015
Phylopstem1.7883831250000002
Phylopflank1.5523444915
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure