Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGCAGCTGCT
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024923
GeneSymbolNUP210
Binding site3949,3962
Score0.846
Seed1
Au0.559
Energy-22.5
Binding len13
Me-5.925
Phylopstem5.208336666666668
Phylopflank2.478835525
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure