Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCACTGCAGCTGGGAC
((.(((((((((.((((....&))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024923
GeneSymbolNUP210
Binding site1028,1045
Score0.923
Seed0
Au0.368
Energy-21.6
Binding len17
Me-6.784
Phylopstem0.2677621333333333
Phylopflank-0.27065536
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure