Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAACCGTTAATGGTGCAGA
(((((.(.(((((((.((((.&)))))))))))....).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024941
GeneSymbolTRAPPC13
Binding site181,204
Score1.0
Seed0
Au0.588
Energy-20.2
Binding len23
Me-8.385
Phylopstem5.360713857142857
Phylopflank4.651607754999999
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure