Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAGAGTAGCTGTAGG
((((((((((..((((((...&)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024942
GeneSymbolC10orf88
Binding site1947,1965
Score0.846
Seed1
Au0.676
Energy-19.0
Binding len18
Me-10.109
Phylopstem0.2321593
Phylopflank0.5175744475
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure