Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAACTATTGTATATGCAT
.((((..((((((((((((((&)))))))))))...)))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024942
GeneSymbolC10orf88
Binding site2233,2257
Score0.923
Seed0
Au0.735
Energy-18.6
Binding len24
Me-7.238
Phylopstem2.892228545882353
Phylopflank2.084540201125
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure