Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGTGTTGTTTGGTTCTACTGCATTGTGGAGCATGCGGGGG
.(((.(((((((((((((....&.))))))))).....)))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024946
GeneSymbolPSME3IP1
Binding site1419,1462
Score0.846
Seed0
Au0.5
Energy-21.0
Binding len24
Me-7.912
Phylopstem-0.13179656111111115
Phylopflank0.40595037125
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure