Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGGTGCTGCCCTAGTACTTTTCTTTGCTGCCTCTGCTGCT
..(((((.(.(((.((((((.&.)))))).))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024946
GeneSymbolPSME3IP1
Binding site1969,2015
Score0.846
Seed0
Au0.515
Energy-20.2
Binding len20
Me-9.37
Phylopstem2.2826
Phylopflank3.438282537500001
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure