Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCCAGCTCAGCTGCT
..(((((((.(((((...(((&)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024947
GeneSymbolPHC3
Binding site221,240
Score0.923
Seed1
Au0.456
Energy-20.6
Binding len19
Me-6.433
Phylopstem1.6089552857142857
Phylopflank3.14178945
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure