Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGAAGGCAACCTGGGCCGCTACCTCAACCACAGTTGCAGC
(((((((((.(((((..((((&.))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366417
GeneSymbolSETDB1
Binding site3738,3781
Score0.846
Seed1
Au0.441
Energy-24.3
Binding len21
Me-5.413
Phylopstem0.5683512222222222
Phylopflank1.7690575725
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure