Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGCAATCGCTACCAGCTGCC
..((((((((((((((..(((&)))..))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024954
GeneSymbolUBTD1
Binding site603,627
Score0.808
Seed1
Au0.412
Energy-22.3
Binding len24
Me-4.957
Phylopstem5.6429381111111105
Phylopflank4.40466579125
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure