Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCTCTGTTGCCAGGC
.(((((((.(((..(((((...&)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024967
GeneSymbolZNF556
Binding site5712,5730
Score0.846
Seed1
Au0.456
Energy-19.2
Binding len18
Me-6.996
Phylopstem-0.09573342857142857
Phylopflank-0.3508523499999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure