Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACCTGCAGCTGTT
..((((((((((((...((((&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024969
GeneSymbolCSRNP3
Binding site5136,5154
Score1.0
Seed1
Au0.588
Energy-21.9
Binding len18
Me-5.925
Phylopstem0.917246230769231
Phylopflank0.47932130625
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure