Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACCACAGTTGCAGC
(((((((((.(((((..((((&))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366418
GeneSymbolSETDB1
Binding site3830,3850
Score0.846
Seed1
Au0.441
Energy-24.1
Binding len20
Me-5.413
Phylopstem6.115740222222223
Phylopflank5.8623844275
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure