Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCCATTTGGAGTGCATGACATTTGCCAGGA
.(((((((....(((((.....&.)))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024989
GeneSymbolPGAP1
Binding site7230,7263
Score0.846
Seed1
Au0.647
Energy-16.8
Binding len20
Me-12.264
Phylopstem-0.10499775714285715
Phylopflank-0.17814618875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure