Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGCATCTGGATTCCATTACAGCCTCTCAGCTGTT
..(((((((.((((((((((.&.)).))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024989
GeneSymbolPGAP1
Binding site4300,4339
Score1.0
Seed1
Au0.515
Energy-23.1
Binding len23
Me-6.2
Phylopstem0.01670299090909093
Phylopflank0.13480007125000004
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure