Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACGGCGGCTGGAGCTGCC
..((((((.(((((((.....&.))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025009
GeneSymbolCEP135
Binding site93,114
Score0.923
Seed1
Au0.456
Energy-22.2
Binding len16
Me-6.013
Phylopstem0.484897
Phylopflank0.33258790875000005
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure