Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATACAACTGTTTTTGCAAA
((((((..(((((((((.(((&))).)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025015
GeneSymbolHSPA12A
Binding site5249,5271
Score0.808
Seed0
Au0.574
Energy-20.7
Binding len22
Me-7.795
Phylopstem5.547904533333334
Phylopflank4.811424295000001
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure