Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGAGCGCAGCTGCT
..(((((((((.(((...(((&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_025049
GeneSymbolPIF1
Binding site476,493
Score0.846
Seed1
Au0.176
Energy-24.3
Binding len17
Me-8.537
Phylopstem1.0119436666666666
Phylopflank0.14778360750000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure